Table of Contents

  • Notices and Trademarks
  • Open this section 1. Introduction
    • Open this section 1.1. Installing Chenomx NMR Suite
      • Windows (64-bit)
      • Windows (32-bit)
      • Mac OS X
      • Linux (64-bit)
      • Linux (32-bit)
    • 1.2. Running Chenomx NMR Suite
    • 1.3. Software Updates
    • 1.4. Tutorial and Sample Files
  • Open this section 2. Handling Samples and Spectra
    • Open this section 2.1. Sample Preparation
      • Preparing Filter Tubes for Sample Filtration
      • Filtering the Sample through Microcentrifuge Filter Tube
      • Internal Standard Solution
    • Open this section 2.2. Spectral Data Acquisition
      • Pulse Sequences
      • Required NMR Parameters
    • Open this section 2.3. Spectral Data Processing
      • Data Processed with Other Software
  • Open this section 3. Common Tasks
    • 3.1. Processing a Spectrum
    • 3.2. Profiling a Spectrum
    • 3.3. Identifying Compounds
    • 3.4. Profiling Overlapped Regions in a Spectrum
    • 3.5. Determining Compound Concentrations
  • Open this section 4. The Basics
    • 4.1. Opening Files
    • 4.2. Importing Spectra
    • 4.3. Saving Files
    • 4.4. Closing Files
    • 4.5. Exiting Modules
    • 4.6. Undo and Redo
    • 4.7. Change Columns
    • Open this section 4.8. Sidebar
      • Legend
      • Files
      • Reference Cards
      • Spectrum Details
      • Processing History
      • Compound Sets
      • Simulation
    • 4.9. Spectrum Overlays
    • Open this section 4.10. Spectrum Graph Tools
      • Show Entire Spectrum
      • Set Zoom
      • Undo/Redo Zoom
      • Auto Zoom
      • Increase/Decrease Vertical Zoom
      • Increase/Decrease Horizontal Zoom
      • Spectrum Graph
      • Spectrum Thumbnail
      • Select Region
    • 4.11. Export Spectrum Image
    • 4.12. Copy Spectrum Image to Clipboard
    • 4.13. Display Options
    • 4.14. Preferences
  • Open this section 5. Processor
    • 5.1. Overview
    • Open this section 5.2. Processing Tools
      • Line Broadening
      • Phase Correction
      • Baseline Correction
      • Shim Correction
      • Region Deletion
      • Reverse Spectrum
      • Batch Process
    • Open this section 5.3. Calibration Tools
      • Calibrate CSI
      • Define Custom CSI
      • Calibrate pH
      • Calibration Tool
    • Open this section 5.4. Information Tools
      • Spectrum Details (Sidebar)
      • Processing History (Sidebar)
    • Open this section 5.5. Importing and Exporting Data
      • Batch Import
      • Send to Profiler
      • Export as JCAMP-DX
  • Open this section 6. Profiler
    • 6.1. Overview
    • Open this section 6.2. Profiling Tools
      • Compound Table
      • Custom Colors
      • Pinned Compounds
      • Starred Compounds
      • Remember Selection
      • Quick Searches
      • Concentrations and Compound Fits
      • Fit Automatically
      • Concentration Fitting and Optimization Tool
      • Enforce Transform Windows
      • Scale Concentrations
      • Batch Edit
      • pH Tool
      • Compound Snapper
      • Batch Fit
    • 6.3. Cluster Navigator
    • Open this section 6.4. Compound Set Tools
      • Compound Sets (Sidebar)
    • Open this section 6.5. Importing and Exporting Data
      • Batch Export
      • Export Compound Table
      • Export Profiled Compounds
      • Import Profile
      • Send to Processor
    • 6.6. Spectral Binning
    • Open this section 6.7. Information Tools
      • Legend (Sidebar)
      • Reference Card Panel (Sidebar)
      • Spectrum Details (Sidebar)
      • Concentration Units
  • Open this section 7. Spin Simulator
    • 7.1. Overview
    • Open this section 7.2. Simulating Tools
      • New Simulation
      • Spin Systems
      • Spin Definitions
      • Spin Navigator
      • J-Modifiers
    • Open this section 7.3. Information Tools
      • Spin Definition (Sidebar)
      • Simulation Details
  • Open this section 8. Compound Builder
    • 8.1. Overview
    • Open this section 8.2. Building Tools
      • New Compound
      • Import Simulation
      • Adding Peaks
      • Selecting Peaks and Clusters
      • Delete Selected Peaks
      • Adjusting Peaks
      • Grouping Peaks as a Cluster
      • Optimize Selected Peak Shapes
      • Generate Cluster for Region
      • Transform Windows
      • pH Sensitivities
      • Manage Cluster IDs
      • Cluster Navigator
    • Open this section 8.3. Information Tools
      • Reference Card Panel (Sidebar)
      • Compound Details
      • Information Panel
    • 8.4. Compound Fit Style
  • Open this section 9. Library Manager
    • 9.1. Overview
    • Open this section 9.2. Library Tools
      • Compound Table
      • Quick Searches
      • Add Compounds
      • Export Compounds
      • Send to Compound Builder
      • Remove Compounds
      • Update Compounds
    • Open this section 9.3. Compound Set Tools
      • Compound Sets (Sidebar)
      • Automatic Compound Sets
      • Compound Sets
      • Smart Compound Sets
      • Rename Compound Sets
      • Remove Compound Sets
    • Open this section 9.4. Reference Card Editor
      • Required Details
      • Optional Details
    • Open this section 9.5. Information Tools
      • Reference Card Panel (Sidebar)
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5.4 Information Tools

Spectrum Details (Sidebar)

Menu Location View > Sidebars > Left Sidebar > Reference Card
Icon
Spectrum Details icon
Menu Location View > Sidebars > Right Sidebar > Reference Card
Icon
Spectrum Details icon

The Spectrum Details Sidebar view displays a summary of the calibration parameters for the current spectrum. It also shows the spectrum's acquisition details, including spectral width, magnet frequency, pulse sequence, and others. At the bottom of the view, there's also space for additional comments.

Tips and Tricks

  • You can edit a spectrum's calibration parameters using Processor's calibration tools.

  • A spectrum's acquisition details cannot be edited.

  • You can edit a spectrum's comments at any time. You must save the spectrum to retain your changes.

Related Topics

  • “Spectrum Details”

  • “Calibrate CSI”

  • “Calibrate pH”

Processing History (Sidebar)

Processing spectra in Processor does not alter your original spectral data. Every processing effect that you add to a spectrum acts as a layer modifying the display of your original data. All of these effects are completely reversible, and are tracked in the Processing History Sidebar view.

While processing a spectrum, you may want to review, edit or reverse one or more of the processing layers that you have already applied. The Processing History maintains a list of every processing layer that you have applied to the current spectrum using Processor. You can review this list to find out the parameters used in each layer, like phase angles or shim correction parameters, step back through past layers to reverse their effects, or edit a layer.

When you import a processed spectrum, Processor imports phase correction, baseline correction and other processing that you may have applied in other processing software. The imported processing effects appear in the Processing History as a layer called External Processing. The External Processing layer is not reversible, nor can you remove or edit it.

Menu Location View > Sidebars > Left Sidebar > Processing History
Icon
Processing History icon
Menu Location View > Sidebars > Right Sidebar > Processing History
Icon
Processing History icon

How do I review and remove processing layers?

  1. Switch to the Processing History view in the Sidebar.

  2. Click the name of a processing layer to review its associated parameters; they appear in the Details box below the list.

  3. Click the Clear button to remove the processing layer that is currently selected.

    Removing a processing layer will also remove all subsequent processing layers.

How do I edit the most recent processing layer?

  1. Switch to the Processing History view in the Sidebar.

  2. Click the Edit button to edit the processing layer that is currently selected.

  3. When you have finished your changes, click the Accept button.

    Editing a processing layer will cause all subsequent processing layers to be removed.

Tips and Tricks

  • The Processing History only tracks processing effects, including phase correction, baseline correction, shim correction, water deletion and line broadening. Changes to spectrum metadata, such as the spectrum details or CSI and pH settings, do not appear in this panel.

  • If you have just accidentally removed or edited a layer in the Processing History, you can use the Undo button to restore it.

Related Topics

  • Chapter 2, Handling Samples and Spectra

  • “Importing Spectra”

  • “Legend”

  • “Processing Tools”

  • “Batch Import”


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5.3 Calibration Tools Home 5.5 Importing and Exporting Data
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Last modified: 30 Jun 2021